Microbacterium phage Rhogar
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Detailed Information for Phage Rhogar | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Florence Lang |
Year Found | 2022 |
Location Found | Pittsburgh, PA United States of America |
Finding Institution | Chatham University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.4498 N, 79.92594 W Map |
Discovery Notes | It was raining when the phage was discovered so the environmental sample was a moist collection. Due to the nature of the deadline and a lack of phage relating to the host revealing within the first sample group, three new samples within the same coordinates were collected. The individual enriched isolations were filtered then they were vortexes together. The phage Rhogar was revealed from the combined solution of potential phage. |
Naming Notes | The name for this phage was inspired by the naming process I went through to create my Dungeons and Dragons character. They are a Vemontail Kobold which started as a level one cleric in the Pathfinder second edition rulebook. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 19, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1408 |
Genome length (bp) | 17448 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | Chatham University |
Annotation Status | In GenBank |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | OR283212 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
GenBank File for Phamerator | Download |