| Detailed Information for Phage TeddyBoy | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Coral O'Brien |
| Year Found | 2018 |
| Location Found | Gloucester, VA USA |
| Finding Institution | Virginia State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 37.409022 N, 76.581367 W Map |
| Discovery Notes | The sample was collected at my family farm in the cattle paddock. I collected the sample underneath some old hay. The soil underneath the hay was moist and damp. The soil itself was a combination of cattle manure and decomposed hay. |
| Naming Notes | I named my phage after our steer, Ted. He was a very gentle giant and would not mind if anyone tried to lay on him or pet him. I collected my sample where he always hung out and spent his time. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 11, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 5829 |
| Genome length (bp) | 17449 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAlucard Anseraureola Aries55 Astro16 Avvas Azizam Aztec Baine BarBear Belthelas BinkBonk Bintii Biscayne Bodhi17 BonaeVitae BoomRoasted Bradley2 Bri160 BrokMonster Bullzi2019 Burgy BurtonThePup Cayde6 Cazares Charbie Chatham Cheesecake Ciel Clownery Concrete DaftyDuck Danimal Danno Dongwon Dooby Douggie EdElric Efeko Eightball Ekko14 Elspeth Erin Gabbspett Gardevoir Gillker Godfather GoldenBlanche Goobery HarperAnne Hernandez44 Horacetta Hulk Jahseh JaimeB Jannah Jerky JoBros JooneeDee Josuke JRok Kaijohn KayPaulus Kevanna KillerTomato Kojax4 KyriosFaba LaviMo Leafy LemonPepper LionelHutz Livingwater Loca Lola20 Lunatic Luxx Majesty ManAs Maneater MasterPitts McShie MelBee03 Miaurora Minima MirimarMandM MrGreen Naby Namsahir NeumannU Niffler Nobel Noelani Oaklynn Octopus Otwor Owens PaoPu Picnic Pondwater PoRanda Publix Puddles3 PuffyCat Quaker Rhogar Rhysand RoscoWindex Sage7 SantasSleigh Sara Scamander Scrunchy SeaWolves Sippinontea Slentz Slizam Snuffles Stem TeddyBoy TimoTea TinyTruffula TomBrady12 Trireme Upsilon Vanisius VitulaEligans Witch Wolfpack Yami Yasuo YertPhresh Yubaba |
| Annotating Institution | Virginia State University |
| Annotation Status | In GenBank |
| Plaque Notes | Teddyboy's plaques are clear and unevenly round. They also show up as different sized circles as well. I have tried to isolate TeddyBoy three times and the plaques still show up as different sizes. |
| Number of Genes | 25 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTeddyBoy_1 TeddyBoy_2 TeddyBoy_3 TeddyBoy_4 TeddyBoy_5 TeddyBoy_6 TeddyBoy_7 TeddyBoy_8 TeddyBoy_9 TeddyBoy_10 TeddyBoy_11 TeddyBoy_12 TeddyBoy_13 TeddyBoy_14 TeddyBoy_15 TeddyBoy_16 TeddyBoy_17 TeddyBoy_18 TeddyBoy_19 TeddyBoy_20 TeddyBoy_21 TeddyBoy_22 TeddyBoy_23 TeddyBoy_24 TeddyBoy_25 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN428062 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 79 |
| Pitt Freezer Box Grid# | F6 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |