Detailed Information for Phage Trireme |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Former names | RayHolt |
Found By | Cameron Kedy and Hari Kotturi |
Year Found | 2019 |
Location Found | Yukon, OK USA |
Finding Institution | University of Central Oklahoma |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 28°C |
GPS Coordinates | 35.518333 N, 97.784722 W Map |
Discovery Notes | The soil was from an area of stagnant water by the side of Canadian river. The soil was a mix of red-clay soil right up to the water, with some of the stagnant water. |
Naming Notes | Character name from Brooklyn-99 |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 24, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 15918 |
Genome length (bp) | 17030 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 69.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Central Oklahoma |
Annotation Status | In GenBank |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ209304 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
129 |
Pitt Freezer Box Grid# |
C3 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |