Detailed Information for Phage Zahlia |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Andrew Amdahl |
Year Found | 2024 |
Location Found | Edcouch, TX United States |
Finding Institution | South Texas College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 26.34804 N, 97.98116 W Map |
Discovery Notes | The soil was somewhat wet with an average amount of organic matter near weeds. It was also collected less than half an inch below the surface. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 7466 |
Genome length (bp) | 17481 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCCCGCCCCA |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | South Texas College |
Annotation Status | QC Complete |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
199 |
Pitt Freezer Box Grid# |
B8 |
Available Files |
GenBank File for Phamerator | Download |