Detailed Information for Phage Alucard |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Jakob O'Neal |
Year Found | 2021 |
Location Found | South Portland, ME United States |
Finding Institution | Southern Maine Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 43.647224 N, 70.227765 W Map |
Discovery Notes | The sample the phage was found in was taken from Southern Maine Community College's community garden. The sample was moist, dark soil taken from a tomato patch. |
Naming Notes | I had Halloween on the brain when I was thinking of a name for the phage. While it isn't a perfect comparison, how phages survive and replicate remind me of vampires. "Alucard" is "Dracula" spelled backwards. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 13, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 5143 |
Genome length (bp) | 17363 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Southern Maine Community College |
Annotation Status | In GenBank |
Plaque Notes | The plaques are 3 mm in diameter on average. The plaques appear to have present but not starkly apparent halos, indicating that the phages are temperate. |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR521072 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
183 |
Pitt Freezer Box Grid# |
E10 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |