| Detailed Information for Phage Gex | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Former names | B0ws3r |
| Found By | Erin Burgmaier, Kayla Boyd |
| Year Found | 2016 |
| Location Found | Arvada, CO USA |
| Finding Institution | University of Colorado Boulder |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.818 N, 105.19 W Map |
| Discovery Notes | Sample was collected from a flower garden that had been filled with store-bought dirt. It was collected on 8/29/16 at 7:46pm; the temperature was approximately 18°C. |
| Naming Notes | We thought it would make our phage sound cool. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 20, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 3724 |
| Genome length (bp) | 43697 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 14 bases |
| Overhang Sequence | CCCGCCGCAATGGG |
| GC Content | 66.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | N |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAggie Andies BabeRuth Bosection6 Butters Carcharodon Charlie Chewbacca Duplicity Fulbright Gex Hanako Jamie19 Journey Kevin1 Magsby Melville MichelleMyBell Nenae Panchino Parmesanjohn PhancyPhin Philonius Phloss Phrann Pipsqueaks Purgamenstris Raymond7 Rebel Redi Rubeelu Schnauzer Scitech ShrimpFriedEgg Shweta Silvafighter Silvy SkinnyPete Smurph Snekmaggedon SpongeBob Tapioca Xeno Xerxes |
| Annotating Institution | University of Colorado Boulder |
| Annotation Status | In GenBank |
| Plaque Notes | Small, clear plaques that were between 0.5-1.0mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 71 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewGex_1 Gex_2 Gex_3 Gex_4 Gex_5 Gex_6 Gex_7 Gex_8 Gex_9 Gex_10 Gex_11 Gex_12 Gex_13 Gex_14 Gex_15 Gex_16 Gex_17 Gex_18 Gex_19 Gex_20 Gex_21 Gex_22 Gex_23 Gex_24 Gex_25 Gex_26 Gex_27 Gex_28 Gex_29 Gex_30 Gex_31 Gex_32 Gex_33 Gex_34 Gex_35 Gex_36 Gex_37 Gex_38 Gex_39 Gex_40 Gex_41 Gex_42 Gex_43 Gex_44 Gex_45 Gex_46 Gex_47 Gex_48 Gex_49 Gex_50 Gex_51 Gex_52 Gex_53 Gex_54 Gex_55 Gex_56 Gex_57 Gex_58 Gex_59 Gex_60 Gex_61 Gex_62 Gex_63 Gex_64 Gex_65 Gex_66 Gex_67 Gex_68 Gex_69 Gex_70 Gex_71 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH697585 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 7.2x10^9 pfu/mL |
| Date of SEA Lysate Titering | Oct 28, 2016 |
| Pitt Freezer Box# | 39 |
| Pitt Freezer Box Grid# | F9 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
