Detailed Information for Phage Luxx |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Brilyn Garrett |
Year Found | 2019 |
Location Found | Edmonton, KY USA |
Finding Institution | Western Kentucky University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 36.9896 N, 85.6705 W Map |
Discovery Notes | Recovered from soil at 5 inch depth in a ditch off of a wooded area. Soil was dense and dark brown with a little moisture. |
Naming Notes | Named after Dodgers 2019 rookie Gavin Lux |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 29, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3000 |
Genome length (bp) | 17463 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Western Kentucky University |
Annotation Status | In GenBank |
Plaque Notes | 2mm turbid plaques that are circular in shape |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT498038 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
9.2x 10^9 pfu/mL |
Pitt Freezer Box# |
100 |
Pitt Freezer Box Grid# |
D11 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |