Detailed Information for Phage RoscoWindex |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Mykyle Wenceslao |
Year Found | 2023 |
Location Found | Charlotte, NC United States |
Finding Institution | Queens University of Charlotte |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 35.182093 N, 80.919032 W Map |
Discovery Notes | Soil collected was dry and near a flowerbed. Temperature outside was 59 degrees F. |
Naming Notes | RoscoWindex because "Rosco" is the name of my favorite stuffed animal and "Windex" because I see phage as the cleaner how it made clearings on the bacterial lawn on the petri dish |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 11, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2741 |
Genome length (bp) | 17453 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Queens University of Charlotte |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PV105565 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
186 |
Pitt Freezer Box Grid# |
B2 |
Available Files |
GenBank File for Phamerator | Download |