| Detailed Information for Phage Scamander |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Duplicates of this Phage | Bernadetta, Rowley |
| Found By | Hallie Smith |
| Year Found | 2017 |
| Location Found | Rock Hill, SC USA |
| Finding Institution | Winthrop University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.941968 N, 81.029007 W Map |
| Discovery Notes | Collected on 10/24/17 at 8:02 am. Temperature was 12 °C. Moist soil, taken approximately 1 inch deep. |
| Naming Notes | Named after Newt Scamander of the Fantastic Beasts and Where to Find Them series. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 6, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1121 |
| Genome length (bp) | 17452 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Winthrop University |
| Annotation Status | In GenBank |
| Number of Genes | 25 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH576963 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
49 |
| Pitt Freezer Box Grid# |
H11 |
| Available Files |
| GenBank File for Phamerator | Download |