Detailed Information for Phage Scrunchy |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Gabrielle Drew Sara Steedley |
Year Found | 2018 |
Location Found | Northampton, MA USA |
Finding Institution | Smith College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 42.1859 N, 72.3817 W Map |
Discovery Notes | This Bacteriophage was found in front of the Smith College campus center. |
Naming Notes | One of us had a pink velvet scrunchie on our wrist. We decided that we would name our phage after the stylish hair accessory. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 14, 2019 |
Sequencing Facility | Smith College |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 24301 |
Genome length (bp) | 17445 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Mary |
Annotation Status | In GenBank |
Plaque Notes | Our plate consisted of 156 clear small plaques. |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN586008 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |