Detailed Information for Phage Biscayne |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Samantha Sanchez, Xavier Purroy |
Year Found | 2023 |
Location Found | Miami, FL USA |
Finding Institution | Florida International University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 25.90988 N, 80.13763 W Map |
Discovery Notes | FIU-BBC in a short-cut grassy area, right next to a pond/small lake with ducks. Dug right next to a small, yellow flower. |
Naming Notes | Collect on FIU Biscayne Bay Campus. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 8, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2400 |
Genome length (bp) | 17529 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Florida International University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978855 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
174 |
Pitt Freezer Box Grid# |
H9 |
Available Files |
GenBank File for Phamerator | Download |