| Detailed Information for Phage AikoCarson | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Amanda Carson, Joanna Kwon, and Nathan Liu |
| Year Found | 2020 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.436889 N, 79.9607 W Map |
| Discovery Notes | The phage was obtained from a dirt sample by Magee-Woman's Hospital. |
| Naming Notes | Aiko came from the name Jene Aiko, a unique artist's name. Carson came from Amanda's, the founder of the phage sample, last name. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 19, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 796 |
| Genome length (bp) | 45241 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTAGGCTT |
| GC Content | 61.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 5/1/2021) |
| Plaque Notes | Medium, haloed, circular morphology Very spread out |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAikoCarson_Draft_1 AikoCarson_Draft_2 AikoCarson_Draft_3 AikoCarson_Draft_4 AikoCarson_Draft_5 AikoCarson_Draft_6 AikoCarson_Draft_7 AikoCarson_Draft_8 AikoCarson_Draft_9 AikoCarson_Draft_10 AikoCarson_Draft_11 AikoCarson_Draft_12 AikoCarson_Draft_13 AikoCarson_Draft_14 AikoCarson_Draft_15 AikoCarson_Draft_16 AikoCarson_Draft_17 AikoCarson_Draft_18 AikoCarson_Draft_19 AikoCarson_Draft_20 AikoCarson_Draft_21 AikoCarson_Draft_22 AikoCarson_Draft_23 AikoCarson_Draft_24 AikoCarson_Draft_25 AikoCarson_Draft_26 AikoCarson_Draft_27 AikoCarson_Draft_28 AikoCarson_Draft_29 AikoCarson_Draft_30 AikoCarson_Draft_31 AikoCarson_Draft_32 AikoCarson_Draft_33 AikoCarson_Draft_34 AikoCarson_Draft_35 AikoCarson_Draft_36 AikoCarson_Draft_37 AikoCarson_Draft_38 AikoCarson_Draft_39 AikoCarson_Draft_40 AikoCarson_Draft_41 AikoCarson_Draft_42 AikoCarson_Draft_43 AikoCarson_Draft_44 AikoCarson_Draft_45 AikoCarson_Draft_46 AikoCarson_Draft_47 AikoCarson_Draft_48 AikoCarson_Draft_49 AikoCarson_Draft_50 AikoCarson_Draft_51 AikoCarson_Draft_52 AikoCarson_Draft_53 AikoCarson_Draft_54 AikoCarson_Draft_55 AikoCarson_Draft_56 AikoCarson_Draft_57 AikoCarson_Draft_58 AikoCarson_Draft_59 AikoCarson_Draft_60 AikoCarson_Draft_61 AikoCarson_Draft_62 AikoCarson_Draft_63 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 125 |
| Pitt Freezer Box Grid# | B5 |
| Available Files | |
| Plaque Picture | Download |