Detailed Information for Phage AikoCarson | |
Discovery Information | |
Isolation Host | Gordonia terrae 3612 |
Found By | Amanda Carson, Joanna Kwon, and Nathan Liu |
Year Found | 2020 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.436889 N, 79.9607 W Map |
Discovery Notes | The phage was obtained from a dirt sample by Magee-Woman's Hospital. |
Naming Notes | Aiko came from the name Jene Aiko, a unique artist's name. Carson came from Amanda's, the founder of the phage sample, last name. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 19, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 796 |
Genome length (bp) | 45241 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCTT |
GC Content | 61.2% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | CT |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
Click to View |
Annotating Institution | University of Pittsburgh |
Annotation Status | Being Annotated (Expected completion by 5/1/2021) |
Plaque Notes | Medium, haloed, circular morphology Very spread out |
Has been Phamerated? | Yes |
Gene List |
Click to ViewAikoCarson_Draft_1 AikoCarson_Draft_2 AikoCarson_Draft_3 AikoCarson_Draft_4 AikoCarson_Draft_5 AikoCarson_Draft_6 AikoCarson_Draft_7 AikoCarson_Draft_8 AikoCarson_Draft_9 AikoCarson_Draft_10 AikoCarson_Draft_11 AikoCarson_Draft_12 AikoCarson_Draft_13 AikoCarson_Draft_14 AikoCarson_Draft_15 AikoCarson_Draft_16 AikoCarson_Draft_17 AikoCarson_Draft_18 AikoCarson_Draft_19 AikoCarson_Draft_20 AikoCarson_Draft_21 AikoCarson_Draft_22 AikoCarson_Draft_23 AikoCarson_Draft_24 AikoCarson_Draft_25 AikoCarson_Draft_26 AikoCarson_Draft_27 AikoCarson_Draft_28 AikoCarson_Draft_29 AikoCarson_Draft_30 AikoCarson_Draft_31 AikoCarson_Draft_32 AikoCarson_Draft_33 AikoCarson_Draft_34 AikoCarson_Draft_35 AikoCarson_Draft_36 AikoCarson_Draft_37 AikoCarson_Draft_38 AikoCarson_Draft_39 AikoCarson_Draft_40 AikoCarson_Draft_41 AikoCarson_Draft_42 AikoCarson_Draft_43 AikoCarson_Draft_44 AikoCarson_Draft_45 AikoCarson_Draft_46 AikoCarson_Draft_47 AikoCarson_Draft_48 AikoCarson_Draft_49 AikoCarson_Draft_50 AikoCarson_Draft_51 AikoCarson_Draft_52 AikoCarson_Draft_53 AikoCarson_Draft_54 AikoCarson_Draft_55 AikoCarson_Draft_56 AikoCarson_Draft_57 AikoCarson_Draft_58 AikoCarson_Draft_59 AikoCarson_Draft_60 AikoCarson_Draft_61 AikoCarson_Draft_62 AikoCarson_Draft_63 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 125 |
Pitt Freezer Box Grid# | B5 |
Available Files | |
Plaque Picture | Download |