Gordonia phage AndPeggy
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Detailed Information for Phage AndPeggy
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByMichael Lauer
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.2838 N, 79.5722 W Map
Discovery NotesFound in soil from the Clapp/Langely/Crawford Complex courtyard. Soil was wet, temperature was approximately 29.4 degrees Celsius.
Naming NotesFrom the Broadway show, Hamilton. Peggy is the underrated younger Schuyler sister that appears last, therefore introduces herself in the song as "and Peggy."
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 2, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1163
Genome length (bp)44609
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCTT
GC Content59.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesLytic, small pinhole morphology.
Has been Phamerated?Yes
Gene List

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AndPeggy_1
(terminase small subunit)

AndPeggy_2

AndPeggy_3
(terminase large subunit)

AndPeggy_4
(portal protein)

AndPeggy_5
(capsid maturation protease)

AndPeggy_6
(scaffolding protein)

AndPeggy_7
(major capsid protein)

AndPeggy_8
(head-to-tail adaptor)

AndPeggy_9
(head-to-tail stopper)

AndPeggy_10

AndPeggy_11
(tail terminator)

AndPeggy_12
(major tail protein)

AndPeggy_13
(tail assembly chaperone)

AndPeggy_14
(tail assembly chaperone)

AndPeggy_15
(tapemeasure protein)

AndPeggy_16
(minor tail protein)

AndPeggy_17
(minor tail protein)

AndPeggy_18
(minor tail protein)

AndPeggy_19
(lysin A, L-Ala-D-Glu peptidase domain)

AndPeggy_20
(lysin A, glycosyl hydrolase domain)

AndPeggy_21
(membrane protein)

AndPeggy_22
(membrane protein)

AndPeggy_23

AndPeggy_24

AndPeggy_25

AndPeggy_26

AndPeggy_27

AndPeggy_28

AndPeggy_29

AndPeggy_30
(helix-turn-helix DNA binding domain protein)

AndPeggy_31

AndPeggy_32

AndPeggy_33
(MerR-like helix-turn-helix DNA binding domain protein)

AndPeggy_34
(hydrolase)

AndPeggy_35

AndPeggy_36

AndPeggy_37
(RecA-like DNA recombinase)

AndPeggy_38
(RecB-like exonuclease/helicase)

AndPeggy_39

AndPeggy_40
(DNA polymerase I)

AndPeggy_41
(deoxycytidylate deaminase)

AndPeggy_42
(lysin B)

AndPeggy_43

AndPeggy_44
(thymidylate synthase)

AndPeggy_45

AndPeggy_46

AndPeggy_47
(MazG-like nucleotide pyrophosphohydrolase)

AndPeggy_48
(thymidylate kinase)

AndPeggy_49

AndPeggy_50
(DNA helicase)

AndPeggy_51

AndPeggy_52

AndPeggy_53

AndPeggy_54

AndPeggy_55
(RecA-like DNA recombinase)

AndPeggy_56

AndPeggy_57

AndPeggy_58

AndPeggy_59

AndPeggy_60

AndPeggy_61

AndPeggy_62

AndPeggy_63
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586036
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload