Gordonia phage GiKK
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Detailed Information for Phage GiKK
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByIsraa Kaadi
Year Found2020
Location FoundMelrose, MA United States
Finding InstitutionSalem State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates42.46331 N, 71.071599 W Map
Naming NotesIsraa K. and Gennady K. worked together on the isolation during Covid. GiKK is a mashup of their initials and is pronounced 'Geek'.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage223
Genome length (bp)47537
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCAT
GC Content62.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionSalem State University
Annotation StatusOverdue (Expected completion by 5/1/2021)
Plaque NotesSmall clear plaques
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 119
Pitt Freezer Box Grid# C3
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload