Gordonia phage Hexbug
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Hexbug
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByDaniel Barszczak
Year Found2021
Location FoundMA United States
Finding InstitutionTufts University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates42.412895 N, 71.13305 W Map
Discovery NotesThe location information was scrambled between two samples but will be clarified soon after redoing part of the procedure.
Naming NotesThey have hexagon heads and are bugs (viruses). They also look like Hexbug toy tracks.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1038
Genome length (bp)47190
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCAT
GC Content63.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionTufts University
Annotation StatusQC Complete
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.18 * 10^9 pfu/ml
Pitt Freezer Box# 136
Pitt Freezer Box Grid# A4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload