Gordonia phage SummitAcademy
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage SummitAcademy
Discovery Information
Isolation HostGordonia rubripertincta Grub38
Found BySummitAcademy Students
Year Found2019
Location FoundProvo, UT USA
Finding InstitutionBrigham Young University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates40.27853 N, 111.73323 W Map
Discovery NotesThis phage was discovered as part of our phage hunters course outreach to a local high school. High school students brought in the soil, we started several enrichment cultures and found just this one phage. About 20 high school students were involved!
Naming NotesIt is named after the high school. It was orginaly named "381" during isolation
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage426
Genome length (bp)47328
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCGGCGGTAGGCTT
GC Content60.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionBrigham Young University
Annotation StatusIn GenBank
Plaque NotesPlaques are clear and medium sized
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

SummitAcademy_1
(terminase small subunit)

SummitAcademy_2

SummitAcademy_3
(terminase large subunit)

SummitAcademy_4
(portal protein)

SummitAcademy_5

SummitAcademy_6
(scaffolding protein)

SummitAcademy_7
(major capsid protein)

SummitAcademy_8
(head-to-tail adaptor)

SummitAcademy_9
(head-to-tail stopper)

SummitAcademy_10

SummitAcademy_11
(tail terminator)

SummitAcademy_12
(major tail protein)

SummitAcademy_13
(tail assembly chaperone)

SummitAcademy_14
(tail assembly chaperone)

SummitAcademy_15
(tape measure protein)

SummitAcademy_16
(minor tail protein)

SummitAcademy_17
(minor tail protein)

SummitAcademy_18

SummitAcademy_19
(lysin A, L-Ala,-D-Glu peptidase domain)

SummitAcademy_20
(lysin A, glycosyl hydrolase domain)

SummitAcademy_21
(holin)

SummitAcademy_22

SummitAcademy_23

SummitAcademy_24

SummitAcademy_25

SummitAcademy_26

SummitAcademy_27

SummitAcademy_28
(minor tail protein)

SummitAcademy_29
(minor tail protein)

SummitAcademy_30

SummitAcademy_31

SummitAcademy_32

SummitAcademy_33

SummitAcademy_34
(SprT-like protease)

SummitAcademy_35

SummitAcademy_36
(MerR-like helix-turn-helix DNA binding domain protein)

SummitAcademy_37

SummitAcademy_38
(nuclease)

SummitAcademy_39

SummitAcademy_40

SummitAcademy_41
(AAA-ATPase)

SummitAcademy_42
(Cas4 family exonuclease)

SummitAcademy_43
(endonuclease VII)

SummitAcademy_44
(DNA polymerase I)

SummitAcademy_45

SummitAcademy_46
(lysin B)

SummitAcademy_47

SummitAcademy_48
(thymidylate synthase)

SummitAcademy_49

SummitAcademy_50

SummitAcademy_51

SummitAcademy_52

SummitAcademy_53

SummitAcademy_54
(dUTPase)

SummitAcademy_55
(polynucleotide kinase)

SummitAcademy_56
(DNA helicase)

SummitAcademy_57

SummitAcademy_58

SummitAcademy_59

SummitAcademy_60

SummitAcademy_61
(DNA primase/helicase)

SummitAcademy_62

SummitAcademy_63

SummitAcademy_64

SummitAcademy_65

SummitAcademy_66

SummitAcademy_67

SummitAcademy_68

SummitAcademy_69

SummitAcademy_70

SummitAcademy_71
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP297531
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload
GenBank File for PhameratorDownload