Gordonia phage KayGee
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Detailed Information for Phage KayGee
Discovery Information
Isolation HostGordonia rubripertincta Grub38
Found ByKylie Gipin
Year Found2021
Location FoundSanta Cruz, CA Santa Cruz
Finding InstitutionUniversity of California, Santa Cruz
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.414 N, 119.8489 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage162
Genome length (bp)48365
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCTT
GC Content60.3%
Sequencing NotesA small percentage (~10%) of the sequencing reads for this phage appear to be from a Cluster CZ phage. It's possible that this phage has a low level of a contaminant phage.
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of California, Santa Cruz
Annotation StatusOverdue (Expected completion by 5/1/2022)
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives