| Detailed Information for Phage Nibbles |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Jessica Chavez |
| Year Found | 2022 |
| Location Found | Las Vegas, NV US |
| Finding Institution | College of Southern Nevada |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 36.178972 N, 115.184189 W Map |
| Discovery Notes | Plaque was taken from a grass field from Lorenzi Park. This phage was taken from enriched isolation. |
| Naming Notes | This plaque is named after my older sister, whose nickname as a running joke is nibbles. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 9, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2696 |
| Genome length (bp) | 45601 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTAGGCAT |
| GC Content | 61.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | College of Southern Nevada |
| Annotation Status | Being Annotated (Expected completion by 5/1/2023) |
| Plaque Notes | Varying size morphology, varies from 1mm-2mm. Plaque formation seems concentration-dependent. The lower dilutions (with higher concentrations of phage) had fewer (and cloudier) plaques compared to the higher dilutions (with lower concentrations of phages when plating). Cloudy halo around perimeter of plaques. |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
