| Detailed Information for Phage Nibbles | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Jessica Chavez |
| Year Found | 2022 |
| Location Found | Las Vegas, NV US |
| Finding Institution | College of Southern Nevada |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 36.178972 N, 115.184189 W Map |
| Discovery Notes | Plaque was taken from a grass field from Lorenzi Park. This phage was taken from enriched isolation. |
| Naming Notes | This plaque is named after my older sister, whose nickname as a running joke is nibbles. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 9, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2696 |
| Genome length (bp) | 45601 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTAGGCAT |
| GC Content | 61.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAgatha AikoCarson Amok AndPeggy Axym Azira BigChungus BillDoor Biskit Burnsey Button Buttrmlkdreams CherryonLim Cleo Cozz Dre3 Elinal Eliott Emalyn Feastonyeet Fribs8 Gibbous GiKK GoldHunter GTE2 Hexbug Horseradish Jamzy KayGee Lauer Margaret Mayweather MScarn Nibbles Nina Nodigi Orla Pons PsychoKiller Quasar SheckWes SketchMex Sopespian SteamedHams SummitAcademy Survivors SweatNTears Tolls Troje Vine Yakult Yarn Yummy |
| Annotating Institution | College of Southern Nevada |
| Annotation Status | Awaiting_QC |
| Plaque Notes | Varying size morphology, varies from 1mm-2mm. Plaque formation seems concentration-dependent. The lower dilutions (with higher concentrations of phage) had fewer (and cloudier) plaques compared to the higher dilutions (with lower concentrations of phages when plating). Cloudy halo around perimeter of plaques. |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewNibbles_Draft_1 Nibbles_Draft_2 Nibbles_Draft_3 Nibbles_Draft_4 Nibbles_Draft_5 Nibbles_Draft_6 Nibbles_Draft_7 Nibbles_Draft_8 Nibbles_Draft_9 Nibbles_Draft_10 Nibbles_Draft_11 Nibbles_Draft_12 Nibbles_Draft_13 Nibbles_Draft_14 Nibbles_Draft_15 Nibbles_Draft_16 Nibbles_Draft_17 Nibbles_Draft_18 Nibbles_Draft_19 Nibbles_Draft_20 Nibbles_Draft_21 Nibbles_Draft_22 Nibbles_Draft_23 Nibbles_Draft_24 Nibbles_Draft_25 Nibbles_Draft_26 Nibbles_Draft_27 Nibbles_Draft_28 Nibbles_Draft_29 Nibbles_Draft_30 Nibbles_Draft_31 Nibbles_Draft_32 Nibbles_Draft_33 Nibbles_Draft_34 Nibbles_Draft_35 Nibbles_Draft_36 Nibbles_Draft_37 Nibbles_Draft_38 Nibbles_Draft_39 Nibbles_Draft_40 Nibbles_Draft_41 Nibbles_Draft_42 Nibbles_Draft_43 Nibbles_Draft_44 Nibbles_Draft_45 Nibbles_Draft_46 Nibbles_Draft_47 Nibbles_Draft_48 Nibbles_Draft_49 Nibbles_Draft_50 Nibbles_Draft_51 Nibbles_Draft_52 Nibbles_Draft_53 Nibbles_Draft_54 Nibbles_Draft_55 Nibbles_Draft_56 Nibbles_Draft_57 Nibbles_Draft_58 Nibbles_Draft_59 Nibbles_Draft_60 Nibbles_Draft_61 Nibbles_Draft_62 Nibbles_Draft_63 Nibbles_Draft_64 Nibbles_Draft_65 Nibbles_Draft_66 Nibbles_Draft_67 Nibbles_Draft_68 Nibbles_Draft_69 Nibbles_Draft_70 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 151 |
| Pitt Freezer Box Grid# | H11 |
| Available Files | |
| Plaque Picture | Download |
