Gordonia phage Emalyn
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Detailed Information for Phage Emalyn
Discovery Information
Isolation HostGordonia terrae 3612
Found BySydney Smith
Year Found2015
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.44517 N, 79.953866 W Map
Discovery NotesI used soil from a flower garden and collected it only about five minutes before shaking and using it to plate so it was very fresh. The soil was also very moist because it was early in the morning.
Naming NotesI named this phage after my roommate.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 13, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage417
Genome length (bp)43982
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCTT
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesEmalyn plaques are relatively small, about 2-3 mm in diameter and have halos.
Number of Genes67
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU963260
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.33 X10^11 pfu/ul
Pitt Freezer Box# 2
Pitt Freezer Box Grid# E3
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload