Detailed Information for Phage GoldHunter |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Elizabeth Rueschhoff |
Year Found | 2021 |
Location Found | New Albany, IN United States |
Finding Institution | Indiana University Southeast |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 26°C |
GPS Coordinates | 38.34334 N, 85.81955 W Map |
Discovery Notes | Found at the Indiana University Southeast Butterfly Garden from soil under approximately 1" of mulch. Soil was moist and had organic matter. |
Naming Notes | Phage named after instructor at our school who created the butterfly garden who also searches for Gold in his time off. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 27, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 3070 |
Genome length (bp) | 46589 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCTT |
GC Content | 60.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CT |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Indiana University Southeast |
Annotation Status | Being Annotated (Expected completion by 10/26/2024) |
Plaque Notes | Plaques were approximately 1 mm in diameter. I felt they were reasonably clear and had smooth margins. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
139 |
Pitt Freezer Box Grid# |
E11 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |