| Detailed Information for Phage Jamzy | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Isabella Humphries |
| Year Found | 2022 |
| Location Found | Cullowhee, NC United States |
| Finding Institution | Western Carolina University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 35.31 N, 83.187222 W Map |
| Discovery Notes | My soil sample was collected in a river, underneath a bridge on campus. It was a dark brown, wet soil sample. |
| Naming Notes | I chose this name because it combines my name and my significant other's name. He's supported throughout my journey of undergraduate research. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 17, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1662 |
| Genome length (bp) | 47245 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTAGGCAT |
| GC Content | 62.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | My plaques are transparent clearings. |
| Other Cluster Members |
Click to ViewAgatha AikoCarson Amok AndPeggy Axym Azira BigChungus Biskit Burnsey Button Buttrmlkdreams CherryonLim Cleo Cozz Dre3 Elinal Eliott Emalyn Feastonyeet Fribs8 Gibbous GiKK GTE2 Hexbug Horseradish Jamzy KayGee Lauer Margaret Mayweather MScarn Nibbles Nina Nodigi Orla Pons PsychoKiller Quasar SheckWes SketchMex Sopespian SteamedHams SummitAcademy Survivors SweatNTears Tolls Troje Vine Yakult Yarn Yummy |
| Annotating Institution | Western Carolina University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2023) |
| Plaque Notes | My plaques are usually small and sometimes hard to see. At lower dilutions, the plaques are quite clear, but as my viral sample is further diluted it becomes more difficult to see. |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewJamzy_Draft_1 Jamzy_Draft_2 Jamzy_Draft_3 Jamzy_Draft_4 Jamzy_Draft_5 Jamzy_Draft_6 Jamzy_Draft_7 Jamzy_Draft_8 Jamzy_Draft_9 Jamzy_Draft_10 Jamzy_Draft_11 Jamzy_Draft_12 Jamzy_Draft_13 Jamzy_Draft_14 Jamzy_Draft_15 Jamzy_Draft_16 Jamzy_Draft_17 Jamzy_Draft_18 Jamzy_Draft_19 Jamzy_Draft_20 Jamzy_Draft_21 Jamzy_Draft_22 Jamzy_Draft_23 Jamzy_Draft_24 Jamzy_Draft_25 Jamzy_Draft_26 Jamzy_Draft_27 Jamzy_Draft_28 Jamzy_Draft_29 Jamzy_Draft_30 Jamzy_Draft_31 Jamzy_Draft_32 Jamzy_Draft_33 Jamzy_Draft_34 Jamzy_Draft_35 Jamzy_Draft_36 Jamzy_Draft_37 Jamzy_Draft_38 Jamzy_Draft_39 Jamzy_Draft_40 Jamzy_Draft_41 Jamzy_Draft_42 Jamzy_Draft_43 Jamzy_Draft_44 Jamzy_Draft_45 Jamzy_Draft_46 Jamzy_Draft_47 Jamzy_Draft_48 Jamzy_Draft_49 Jamzy_Draft_50 Jamzy_Draft_51 Jamzy_Draft_52 Jamzy_Draft_53 Jamzy_Draft_54 Jamzy_Draft_55 Jamzy_Draft_56 Jamzy_Draft_57 Jamzy_Draft_58 Jamzy_Draft_59 Jamzy_Draft_60 Jamzy_Draft_61 Jamzy_Draft_62 Jamzy_Draft_63 Jamzy_Draft_64 Jamzy_Draft_65 Jamzy_Draft_66 Jamzy_Draft_67 Jamzy_Draft_68 Jamzy_Draft_69 Jamzy_Draft_70 Jamzy_Draft_71 Jamzy_Draft_72 Jamzy_Draft_73 Jamzy_Draft_74 Jamzy_Draft_75 Jamzy_Draft_76 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 3.3 x 10^8 PFU/mL |
| Pitt Freezer Box# | 153 |
| Pitt Freezer Box Grid# | B7 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
