Gordonia phage SheckWes
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Detailed Information for Phage SheckWes
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByTaylor Savage, Dane Jester, Kevin Merino
Year Found2018
Location FoundArkadelphia, AR USA
Finding InstitutionOuachita Baptist University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.1793 N, 93.0998 W Map
Discovery NotesThis phage was found in dirt near a river.
Naming NotesA friend of our's uses this name as a musical alias.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 29, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage676
Genome length (bp)47618
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCGGCGGTAGGCTT
GC Content60.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionOuachita Baptist University
Annotation StatusIn GenBank
Plaque Notes3mm in diameter, round, edges are sharp and clear
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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SheckWes_1

SheckWes_2

SheckWes_3
(terminase)

SheckWes_4
(portal protein)

SheckWes_5
(capsid maturation protease)

SheckWes_6
(scaffolding protein)

SheckWes_7
(major capsid protein)

SheckWes_8
(head-to-tail adaptor)

SheckWes_9
(head-to-tail adaptor)

SheckWes_10

SheckWes_11
(head-to-tail adaptor)

SheckWes_12
(major tail protein)

SheckWes_13
(tail assembly chaperone)

SheckWes_14
(tail assembly chaperone)

SheckWes_15
(tape measure protein)

SheckWes_16
(minor tail protein)

SheckWes_17
(minor tail protein)

SheckWes_18
(minor tail protein)

SheckWes_19
(lysin A, L-Ala-D-Glu peptidase domain)

SheckWes_20
(lysin A, glycosyl hydrolase domain)

SheckWes_21
(membrane protein)

SheckWes_22

SheckWes_23
(membrane protein)

SheckWes_24

SheckWes_25

SheckWes_26

SheckWes_27

SheckWes_28
(tail fiber)

SheckWes_29

SheckWes_30

SheckWes_31

SheckWes_32

SheckWes_33

SheckWes_34

SheckWes_35

SheckWes_36

SheckWes_37

SheckWes_38

SheckWes_39
(MerR-like helix-turn-helix DNA binding domain protein)

SheckWes_40

SheckWes_41
(hydrolase)

SheckWes_42
(membrane protein)

SheckWes_43

SheckWes_44
(RecA-like DNA recombinase)

SheckWes_45

SheckWes_46
(RecB-like exonuclease/helicase)

SheckWes_47

SheckWes_48
(DNA polymerase I)

SheckWes_49
(deoxycytidylate deaminase)

SheckWes_50
(lysin B)

SheckWes_51

SheckWes_52
(thymidylate synthase)

SheckWes_53

SheckWes_54

SheckWes_55

SheckWes_56

SheckWes_57

SheckWes_58
(MazG-like nucleotide pyrophosphohydrolase)

SheckWes_59
(kinase)

SheckWes_60
(helicase)

SheckWes_61

SheckWes_62

SheckWes_63

SheckWes_64

SheckWes_65
(RecA-like DNA recombinase)

SheckWes_66

SheckWes_67

SheckWes_68

SheckWes_69

SheckWes_70

SheckWes_71

SheckWes_72

SheckWes_73

SheckWes_74

SheckWes_75

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967385
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.45 x 10^9
Pitt Freezer Box# 78
Pitt Freezer Box Grid# H12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload