Gordonia phage MaVan
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Detailed Information for Phage MaVan
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByTrang Thien Ma
Year Found2023
Location FoundTampa, FL USA
Finding InstitutionUniversity of South Florida
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates28.06575 N, 82.4296 W Map
Discovery NotesThe soil sample was collected in the ground sewer by a small pond near Walmart Supercenter in Tampa, FL. The surrounding was filled with trash and dirt, smelling quite stinky. The environmental temperature was approximately 32 degrees Celsius, and the weather was sunny and windy. The sample was highly wet, fluid, smelly, and contained much dirt and leaves.
Naming NotesThe phage was named after my father's last name - MA, and my mother's last name - VAN. This is my first authentic research ever and I treasure every opportunity I got during this journey. My parents spent their whole life working very hard to support all my decisions and the path I chose. They could not be here to witness this journey with me, so I wanted to do this as a present to appreciate them.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 6, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1495
Genome length (bp)45366
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCAT
GC Content61.9%
Fasta file available?Yes: Download fasta file
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of South Florida
Annotation StatusIn GenBank
Plaque NotesBoth small and quite large, round and temperate.
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP725416
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 172
Pitt Freezer Box Grid# G6
Available Files
GenBank File for PhameratorDownload