Gordonia phage Bubble
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| Detailed Information for Phage Bubble | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Jadyn Ancosky |
| Year Found | 2025 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.433296 N, 79.956337 W Map |
| Discovery Notes | Our group members and Jadyn Ancosky, Sarah Caruso, and Joanna Fan. During spring semester 2025, this sample was collected from under a large tree. The surrounding environment was grass. The texture was wet and powdery. |
| Naming Notes | We named our bacteriophage "bubble" because the plaques from the phage activity look like bubbles. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 6, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Paired-end reads |
| Read Length | 300 bp |
| Approximate Shotgun Coverage | 6504 |
| Genome length (bp) | 46528 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | CGGTAGGCTT |
| GC Content | 60.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAgatha AikoCarson Amok AndPeggy Axym Azira Balloona Bavilard BigChungus BillDoor Biskit Blondies Bubble Burnsey Button Buttrmlkdreams CanesSauce CaramelLatte Carsonalex CherryonLim ChickenTender ChocoMunchkin Cleo Cozz Dre3 Elinal Eliott Emalyn Feastonyeet Fribs8 Gibbous GiKK GoldHunter GTE2 Hexbug HippoPololi Horseradish Jamzy KayGee Lauer MAnor Margaret MaVan Mayweather MScarn MunkgeeRoachy Nibbles Nina Nodigi Orla Pons PotPie PsychoKiller Quasar RanchParmCat RedBaron SheckWes SketchMex Socotra Sopespian Starburst SteamedHams SummitAcademy Survivors SweatNTears Tolls Troje Typhonomachy Vine Wolfwood Yakult Yarn Yucky Yummy Zareef |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 2/6/2026) |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 216 |
| Pitt Freezer Box Grid# | C4 |