Gordonia phage ChickenTender
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Detailed Information for Phage ChickenTender
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByCooper Braun, Navin Kunakornvanich
Year Found2024
Location FoundSpokane, WA United States of America
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates47.667817 N, 117.401007 W Map
Discovery NotesOur sample was taken from the front of the oldest dorm in the middle of campus. The soil was pretty dry but maintained. We discovered it on a sunny but colder day in early fall, around the end of August.
Naming NotesMy partner and I just did the first thing that happened to pop into our heads so, chicken tender.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 13, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage3684
Genome length (bp)45255
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCTT
GC Content60.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionGonzaga University
Annotation StatusBeing Annotated (Expected completion by 5/1/2025)
Plaque NotesThe plaques tend to be on the smaller side and while still pretty round, they are slightly jagged. The plates and plaques are slightly turbid because the bacteria gives an orange hue. Along with the plaque clearings, theres a ring or halo of slight clearing around all of the plaques.
MorphotypeSiphoviridae
Has been Phamerated?No
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload