Detailed Information for Phage HippoPololi |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | LaPrecious Harris and Hayley Mahan |
Year Found | 2023 |
Location Found | Durham, NC United States |
Finding Institution | Durham Technical Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 35.99537 N, 78.88285 W Map |
Discovery Notes | Found in LaPrecious’s backyard in her soil. |
Naming Notes | We named our phage “Hungry Hippo” in Hawaiian because the phage consumed all of the bacteria from the first set of plates. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 20, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 151 |
Genome length (bp) | 45423 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCAT |
GC Content | 61.2% |
Sequencing Notes | This phage was sequenced as part of a DOGEMS sample. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CT |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Durham Technical Community College |
Annotation Status | In GenBank |
Plaque Notes | 1 mm |
Number of Genes | 68 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978879 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
175 |
Pitt Freezer Box Grid# |
H4 |
Available Files |
GenBank File for Phamerator | Download |