| Detailed Information for Phage SteamedHams |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | John Perkins |
| Year Found | 2018 |
| Location Found | Alexandria, VA USA |
| Finding Institution | George Mason University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 20°C |
| GPS Coordinates | 38.793993 N, 77.043856 W Map |
| Discovery Notes | Soil sample was taken from a forest floor near a community garden in Jones Point Park, located on the southern tip of Old Town Alexandria. Soil was damp and conditions generally cooler than average due to recent rainfall. Sample was taken in the afternoon at 17:11. |
| Naming Notes | Named after an Albany expression I learned during an unforgettable luncheon. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 14, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 2138 |
| Genome length (bp) | 44571 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTAGGCTT |
| GC Content | 59.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | George Mason University |
| Annotation Status | In GenBank |
| Plaque Notes | SteamedHams produced very small and clear plaques |
| Number of Genes | 66 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN234215 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
5.1e10 |
| Pitt Freezer Box# |
89 |
| Pitt Freezer Box Grid# |
B5 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
