Detailed Information for Phage SweatNTears |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Jacob Cote, Ben Gove |
Year Found | 2018 |
Location Found | ME USA |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 44.588706 N, 69.293424 W Map |
Discovery Notes | Isolated from soil that containing donkey manure compost. Sample taken from the Common Ground Fair in Unity, Maine. |
Naming Notes | The first phage we isolated after many, many direct and enriched isolation attempts with other soil samples. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 15, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 637 |
Genome length (bp) | 45917 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCTT |
GC Content | 59.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CT |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Lysogeny Notes | Efficiency of lysogeny calculated to be 42.1% in G.terrae. Host range includes G. terrae, Rhodococcus erythropolis, and potentially Gordonia rubripertincta. |
Other Cluster Members |
|
Annotating Institution | University of Maine, Honors College |
Annotation Status | In GenBank |
Plaque Notes | Small, pinpoint plaques with turbid halos around a fully cleared center. Variability in plaque morphology has been observed at high lysate concentrations. |
Morphotype | Siphoviridae |
Number of Genes | 71 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK967383 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
85 |
Pitt Freezer Box Grid# |
A5 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |