| Detailed Information for Phage MAnor |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Camilla Augustus |
| Year Found | 2023 |
| Location Found | Birmingham, AL United States |
| Finding Institution | Spelman College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.429512 N, 86.681819 W Map |
| Discovery Notes | The soil sample was taken from an open, grassy area with moist soil. The sample was taken near the concrete. |
| Naming Notes | The phage was retrieved from my home, therefore I named it Manor. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 18, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 865 |
| Genome length (bp) | 48333 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | CGGCGGTAGGCTT |
| GC Content | 60.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Spelman College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques were clear. Although the bacterial lawn made it look turbid. The plaque size was consistent across the entire plate, with each size being around 0.1 cm. |
| Morphotype | Siphoviridae |
| Number of Genes | 73 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ184784 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
188 |
| Pitt Freezer Box Grid# |
A4 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
