Gordonia phage SketchMex
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| Detailed Information for Phage SketchMex | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Gracie Jones, Beau Penningtion, Rachel David |
| Year Found | 2017 |
| Location Found | Arkadelphia, AR USA |
| Finding Institution | Ouachita Baptist University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.1431 N, 93.0827 W Map |
| Naming Notes | Named based on location of soil sample |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 6, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2234 |
| Genome length (bp) | 45847 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTAGGCTT |
| GC Content | 60.5% |
| Sequencing Notes | Was sequenced as a deliberately mixed sample along with DelRio. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | we think our phage is a temperate phage based on the turbidity of our plaques |
| Other Cluster Members | |
| Annotating Institution | Ouachita Baptist University |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are very small and cloudy with undefined edges |
| Number of Genes | 67 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH450132 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 3.6x10^8 pfu/ml |
| Pitt Freezer Box# | 48 |
| Pitt Freezer Box Grid# | F6 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |