Detailed Information for Phage Tolls |
Discovery Information |
Isolation Host | Gordonia terrae CAG3 |
Found By | Robert Fryberger |
Year Found | 2018 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Unavailable |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.446519 N, 79.953826 W Map |
Discovery Notes | Collected from soil form a flower bed, slightly moist, air temp of 24 C. Enriched at 30 for 48 hours before plating. |
Naming Notes | Friends nickname |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 16, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1419 |
Genome length (bp) | 44786 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCTT |
GC Content | 59.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CT |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of California, Los Angeles |
Annotation Status | In GenBank |
Plaque Notes | Forms clear plaques of approximately approximately 1mm diameter, very consistent in this morphology. |
Number of Genes | 67 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW862988 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
96 |
Pitt Freezer Box Grid# |
D5 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |