Arthrobacter phage Wildwest
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Detailed Information for Phage Wildwest
Discovery Information
Isolation HostArthrobacter atrocyaneus NRRL B-2883
Found ByAngelina Spencer
Year Found2022
Location FoundSt. Charles, MO USA
Finding InstitutionBaylor University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature32°C
GPS Coordinates38.716786 N, 90.477583 W Map
Discovery NotesThe soil was collected near some flower bushes that were next to a large lake. The soil was cool and slightly moist.
Naming NotesNamed after Joe Wildwest, a character from one of my favorite video games, "Fossil Fighters: Champions".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1849
Genome length (bp)43653
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAAGGGGCAT
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAZ
SubclusterAZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionBaylor University
Annotation StatusIn GenBank
Plaque NotesPlaques are typically around 0.2 cm in diameter. There is slight variation in size: a few plaques are much smaller in size.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Wildwest_1

Wildwest_2
(terminase small subunit)

Wildwest_3
(terminase large subunit)

Wildwest_4
(portal protein)

Wildwest_5
(capsid maturation protease and VIP2-like ADP-ribosyltransferase toxin)

Wildwest_6

Wildwest_7
(scaffolding protein)

Wildwest_8
(major capsid protein)

Wildwest_9
(head-to-tail adaptor)

Wildwest_10

Wildwest_11
(head-to-tail stopper)

Wildwest_12

Wildwest_13
(tail terminator)

Wildwest_14
(major tail protein)

Wildwest_15
(tail assembly chaperone)

Wildwest_16
(tail assembly chaperone)

Wildwest_17
(tape measure protein)

Wildwest_18
(minor tail protein)

Wildwest_19
(minor tail protein)

Wildwest_20
(minor tail protein)

Wildwest_21
(minor tail protein)

Wildwest_22

Wildwest_23

Wildwest_24

Wildwest_25
(deoxynucleoside monophosphate kinase)

Wildwest_26

Wildwest_27
(RecB-like exonuclease/helicase)

Wildwest_28
(nucleoside deoxyribosyltransferase)

Wildwest_29
(LAGLIDADG endonuclease)

Wildwest_30
(recombination directionality factor)

Wildwest_31

Wildwest_32

Wildwest_33
(NrdH-like glutaredoxin)

Wildwest_34
(metallophosphoesterase)

Wildwest_35
(Holliday junction resolvase)

Wildwest_36

Wildwest_37
(DNA primase/helicase)

Wildwest_38

Wildwest_39

Wildwest_40
(DNA polymerase I)

Wildwest_41
(DNA ligase)

Wildwest_42

Wildwest_43
(DNA binding protein)

Wildwest_44
(G-I-Y Y-I-G endonuclease)

Wildwest_45
(helix-turn-helix DNA binding domain protein)

Wildwest_46
(SprT-like protease)

Wildwest_47

Wildwest_48

Wildwest_49
(serine integrase)

Wildwest_50

Wildwest_51

Wildwest_52

Wildwest_53

Wildwest_54
(endolysin)

Wildwest_55

Wildwest_56

Wildwest_57

Wildwest_58

Wildwest_59

Wildwest_60

Wildwest_61

Wildwest_62

Wildwest_63

Wildwest_64

Wildwest_65
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR521060
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 162
Pitt Freezer Box Grid# B6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload