| Detailed Information for Phage Asa16 | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Alia Abdulla |
| Year Found | 2020 |
| Location Found | New Haven, CT United States |
| Finding Institution | Southern Connecticut State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 41.3347 N, 72.9421 W Map |
| Discovery Notes | There was a rainstorm a few days before the soil collection happened. On the day of collection, it was sunny, however, sunlight did not shine on the collection area. When the soil was taken, the outside temperature was 17.8 degrees Celsius. Also, the site was next to a trail, which looked as if it was hardly used. At the collection site, 20 millimeters were dug into the ground with a spatula, and 15 milliliters of the soil was taken. The soil was damp and was surrounded by decomposing leaves and sticks. The collection happened around 9:04 AM on August 31, 2020. This was the second soil sample collected that day. |
| Naming Notes | I wanted the name of my bacteriophage to be significant, so I decided to name it "Asa16." "Asa" has a meaning in multiple languages. A few of the languages are Hebrew, where it means healer; Japanese, where it means morning (symbolic for new beginnings); and Persian, where it means powerful and beautiful. "16" in the name represents the age I was when I collected the bacteriophage. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 7, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2348 |
| Genome length (bp) | 43601 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAAGGGGCAT |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AZ |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAdolin Adumb2043 AEgle AGrandiflora Amyev Asa16 Ascela Berrie Cassia Community Crewmate Cyan DrManhattan DrSierra Elezi Emotion Eraser Iter Janeemi Joemato JohnDoe Jstan Kaylissa KeAlii Lego Liebe Lizalica London MaGuCo Maureen Mudpuppy Niobe Nitro ObiToo Phives Pixelle Powerpuff Reedo Simpson Snek Tallboi Tbone TforTroy Tian Tuck Tutumahutu Tweety19 VResidence VroomVroom Warda Wildwest Yang YesChef |
| Annotating Institution | Southern Connecticut State University |
| Annotation Status | In GenBank |
| Plaque Notes | Medium plaques with an average diameter of 4.74 mm. The center of each plaque is clear with a turbid ring surrounding it. |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAsa16_1 Asa16_2 Asa16_3 Asa16_4 Asa16_5 Asa16_6 Asa16_7 Asa16_8 Asa16_9 Asa16_10 Asa16_11 Asa16_12 Asa16_13 Asa16_14 Asa16_15 Asa16_16 Asa16_17 Asa16_18 Asa16_19 Asa16_20 Asa16_21 Asa16_22 Asa16_23 Asa16_24 Asa16_25 Asa16_26 Asa16_27 Asa16_28 Asa16_29 Asa16_30 Asa16_31 Asa16_32 Asa16_33 Asa16_34 Asa16_35 Asa16_36 Asa16_37 Asa16_38 Asa16_70 Asa16_39 Asa16_40 Asa16_41 Asa16_42 Asa16_43 Asa16_44 Asa16_45 Asa16_46 Asa16_47 Asa16_48 Asa16_49 Asa16_50 Asa16_51 Asa16_52 Asa16_53 Asa16_54 Asa16_55 Asa16_56 Asa16_57 Asa16_58 Asa16_59 Asa16_60 Asa16_61 Asa16_62 Asa16_63 Asa16_64 Asa16_65 Asa16_66 Asa16_67 Asa16_68 Asa16_69 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ681506 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 3.9e9 |
| Pitt Freezer Box# | 129 |
| Pitt Freezer Box Grid# | F2 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
