| Detailed Information for Phage Asa16 | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Alia Abdulla |
| Year Found | 2020 |
| Location Found | New Haven, CT United States |
| Finding Institution | Southern Connecticut State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 41.3347 N, 72.9421 W Map |
| Discovery Notes | There was a rainstorm a few days before the soil collection happened. On the day of collection, it was sunny, however, sunlight did not shine on the collection area. When the soil was taken, the outside temperature was 17.8 degrees Celsius. Also, the site was next to a trail, which looked as if it was hardly used. At the collection site, 20 millimeters were dug into the ground with a spatula, and 15 milliliters of the soil was taken. The soil was damp and was surrounded by decomposing leaves and sticks. The collection happened around 9:04 AM on August 31, 2020. This was the second soil sample collected that day. |
| Naming Notes | I wanted the name of my bacteriophage to be significant, so I decided to name it "Asa16." "Asa" has a meaning in multiple languages. A few of the languages are Hebrew, where it means healer; Japanese, where it means morning (symbolic for new beginnings); and Persian, where it means powerful and beautiful. "16" in the name represents the age I was when I collected the bacteriophage. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 7, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2348 |
| Genome length (bp) | 43601 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAAGGGGCAT |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AZ |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Southern Connecticut State University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2021) |
| Plaque Notes | Medium plaques with an average diameter of 4.74 mm. The center of each plaque is clear with a turbid ring surrounding it. |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAsa16_Draft_1 Asa16_Draft_2 Asa16_Draft_3 Asa16_Draft_4 Asa16_Draft_5 Asa16_Draft_6 Asa16_Draft_7 Asa16_Draft_8 Asa16_Draft_9 Asa16_Draft_10 Asa16_Draft_11 Asa16_Draft_12 Asa16_Draft_13 Asa16_Draft_14 Asa16_Draft_15 Asa16_Draft_16 Asa16_Draft_17 Asa16_Draft_18 Asa16_Draft_19 Asa16_Draft_20 Asa16_Draft_21 Asa16_Draft_22 Asa16_Draft_23 Asa16_Draft_24 Asa16_Draft_25 Asa16_Draft_26 Asa16_Draft_27 Asa16_Draft_28 Asa16_Draft_29 Asa16_Draft_30 Asa16_Draft_31 Asa16_Draft_32 Asa16_Draft_33 Asa16_Draft_34 Asa16_Draft_35 Asa16_Draft_36 Asa16_Draft_37 Asa16_Draft_38 Asa16_Draft_39 Asa16_Draft_40 Asa16_Draft_41 Asa16_Draft_42 Asa16_Draft_43 Asa16_Draft_44 Asa16_Draft_45 Asa16_Draft_46 Asa16_Draft_47 Asa16_Draft_48 Asa16_Draft_49 Asa16_Draft_50 Asa16_Draft_51 Asa16_Draft_52 Asa16_Draft_53 Asa16_Draft_54 Asa16_Draft_55 Asa16_Draft_56 Asa16_Draft_57 Asa16_Draft_58 Asa16_Draft_59 Asa16_Draft_60 Asa16_Draft_61 Asa16_Draft_62 Asa16_Draft_63 Asa16_Draft_64 Asa16_Draft_65 Asa16_Draft_66 Asa16_Draft_67 Asa16_Draft_68 Asa16_Draft_69 Asa16_Draft_70 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| SEA Lysate Titer | 3.9e9 |
| Available Files | |
| Plaque Picture | Download |