Arthrobacter phage Niobe
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Detailed Information for Phage Niobe
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByErica Sellers
Year Found2020
Location FoundNew Haven, CT United States
Finding InstitutionSouthern Connecticut State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates41.33349 N, 72.945666 W Map
Discovery NotesFound at the edge of a garden near a building. Garden contained plants such as pachysandra, rhododendron, and some kind of ivy. The area had no disturbed soil indicating no recent animal activity, and was largely shaded by vegetation, getting little sunlight. The weather had ranged from 32.8°C-16.1°C in the week before collection. There had been devastating thunderstorms the week before collection.

Depth: 4cm

Temperature when collected: 18.3°C
Naming NotesNamed after the queen from Greek mythology.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 7, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1729
Genome length (bp)43602
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAAGGGGCAT
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAZ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionSouthern Connecticut State University
Annotation StatusBeing Annotated (Expected completion by 5/1/2021)
Plaque NotesAverage of 8 mm in diameter, circular. Temperature morphology, clear inner circle surrounded by a cloudy outer circle.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 7.5e10
Available Files
Plaque PictureDownload
EM PictureDownload