Arthrobacter phage Joemato
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Detailed Information for Phage Joemato
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-2880
Found ByOlivia Sommers
Year Found2022
Location FoundOttawa, Canada
Finding InstitutionUniversity of Ottawa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature8°C
GPS Coordinates45.430097 N, 75.560669 W Map
Discovery NotesCollected on September 15, 2022 at 7:55 AM. Retrieved at a community garden plot from the base of a tomato plant.
Naming NotesThe name 'Joemato' is a tribute to the founder's dad, Joe, who went with her to collect the soil sample from a tomato plant.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage729
Genome length (bp)43848
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAAGGGGCAT
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAZ
SubclusterAZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Ottawa
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Joemato_1
(terminase small subunit)

Joemato_2
(terminase large subunit)

Joemato_3
(portal protein)

Joemato_4
(capsid maturation protease and VIP2-like ADP-ribosyltransferase toxin)

Joemato_5

Joemato_6
(scaffolding protein)

Joemato_7
(major capsid protein)

Joemato_8
(head-to-tail adaptor)

Joemato_9

Joemato_10
(head-to-tail stopper)

Joemato_11

Joemato_12
(tail terminator)

Joemato_13
(major tail protein)

Joemato_14
(tail assembly chaperone)

Joemato_15
(tail assembly chaperone)

Joemato_16
(tape measure protein)

Joemato_17
(minor tail protein)

Joemato_18
(minor tail protein)

Joemato_19
(minor tail protein)

Joemato_20
(minor tail protein)

Joemato_21

Joemato_22

Joemato_23

Joemato_24
(deoxynucleoside monophosphate kinase)

Joemato_25

Joemato_26
(exonuclease)

Joemato_27
(nucleoside deoxyribosyltransferase)

Joemato_28
(LAGLIDADG endonuclease)

Joemato_29
(recombination directionality factor)

Joemato_30

Joemato_31

Joemato_32

Joemato_33
(NrdH-like glutaredoxin)

Joemato_34

Joemato_35
(Holliday junction resolvase)

Joemato_36

Joemato_37
(DNA methyltransferase)

Joemato_38
(DNA primase/helicase)

Joemato_39

Joemato_40

Joemato_41
(DNA polymerase I)

Joemato_42

Joemato_43
(DNA ligase)

Joemato_44

Joemato_45
(DNA binding protein)

Joemato_46
(DNA binding protein)

Joemato_47
(SprT-like protease)

Joemato_48

Joemato_49

Joemato_50
(serine integrase)

Joemato_51

Joemato_52
(RNA binding protein)

Joemato_53

Joemato_54

Joemato_55

Joemato_56

Joemato_57

Joemato_58
(endolysin)

Joemato_59

Joemato_60

Joemato_61

Joemato_62

Joemato_63

Joemato_64

Joemato_65

Joemato_66

Joemato_67

Joemato_68

Joemato_69

Joemato_70

Joemato_71
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ114746
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 154
Pitt Freezer Box Grid# D7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload