Detailed Information for Phage Joemato |
Discovery Information |
Isolation Host | Arthrobacter globiformis NRRL B-2880 |
Found By | Olivia Sommers |
Year Found | 2022 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 8°C |
GPS Coordinates | 45.430097 N, 75.560669 W Map |
Discovery Notes | Collected on September 15, 2022 at 7:55 AM. Retrieved at a community garden plot from the base of a tomato plant. |
Naming Notes | The name 'Joemato' is a tribute to the founder's dad, Joe, who went with her to collect the soil sample from a tomato plant. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 5, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 729 |
Genome length (bp) | 43848 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAGGGGCAT |
GC Content | 67.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AZ |
Subcluster | AZ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Ottawa |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ114746 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
154 |
Pitt Freezer Box Grid# |
D7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |