Detailed Information for Phage Lizalica |
Discovery Information |
Isolation Host | Arthrobacter globiformis NRRL B-2880 |
Former names | Alollipop |
Found By | Kieran Furlong |
Year Found | 2020 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 11°C |
GPS Coordinates | 45.38592 N, 75.705088 W Map |
Discovery Notes | The phage was found in a soil sample located about 2 meters from a pond in Fletcher's Wildlife Garden in Ottawa, Canada. The soil sample was taken 3cm-5cm below the surface in the morning of September 17, 2020. A link to the park's website: https://ofnc.ca/programs/fletcher-wildlife-garden/fwg-habitats/amphibian-pond |
Naming Notes | I asked my niece Alice for help naming the bacteriophage. She saw a transmission electron microscope picture of a phage and decided it looked like a lollipop. Lollipop was already taken so we named it Lizalica - the Bosnian translation of lollipop. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 14, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 661 |
Genome length (bp) | 43055 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAGGGGCAT |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AZ |
Subcluster | AZ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Ottawa |
Annotation Status | In GenBank |
Plaque Notes | Large clear plaques |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OL549192 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
128 |
Pitt Freezer Box Grid# |
E11 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |