Detailed Information for Phage Lizalica | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Former names | Alollipop |
Found By | Kieran Furlong |
Year Found | 2020 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | 11°C |
GPS Coordinates | 45.38592 N, 75.705088 W Map |
Discovery Notes | The phage was found in a soil sample located about 2 meters from a pond in Fletcher's Wildlife Garden in Ottawa, Canada. The soil sample was taken 3cm-5cm below the surface in the morning of September 17, 2020. A link to the park's website: https://ofnc.ca/programs/fletcher-wildlife-garden/fwg-habitats/amphibian-pond |
Naming Notes | I asked my niece Alice for help naming the bacteriophage. She saw a transmission electron microscope picture of a phage and decided it looked like a lollipop. Lollipop was already taken so we named it Lizalica - the Bosnian translation of lollipop. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 14, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 661 |
Genome length (bp) | 43055 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAGGGGCAT |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | AZ |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members | |
Annotating Institution | University of Ottawa |
Annotation Status | Being Annotated (Expected completion by 5/1/2021) |
Plaque Notes | Large clear plaques |
Has been Phamerated? | Yes |
Gene List |
Click to ViewLizalica_Draft_1 Lizalica_Draft_2 Lizalica_Draft_3 Lizalica_Draft_4 Lizalica_Draft_5 Lizalica_Draft_6 Lizalica_Draft_7 Lizalica_Draft_8 Lizalica_Draft_9 Lizalica_Draft_10 Lizalica_Draft_11 Lizalica_Draft_12 Lizalica_Draft_13 Lizalica_Draft_14 Lizalica_Draft_15 Lizalica_Draft_16 Lizalica_Draft_17 Lizalica_Draft_18 Lizalica_Draft_19 Lizalica_Draft_20 Lizalica_Draft_21 Lizalica_Draft_22 Lizalica_Draft_23 Lizalica_Draft_24 Lizalica_Draft_25 Lizalica_Draft_26 Lizalica_Draft_27 Lizalica_Draft_28 Lizalica_Draft_29 Lizalica_Draft_30 Lizalica_Draft_31 Lizalica_Draft_32 Lizalica_Draft_33 Lizalica_Draft_34 Lizalica_Draft_35 Lizalica_Draft_36 Lizalica_Draft_37 Lizalica_Draft_38 Lizalica_Draft_39 Lizalica_Draft_40 Lizalica_Draft_41 Lizalica_Draft_42 Lizalica_Draft_43 Lizalica_Draft_44 Lizalica_Draft_45 Lizalica_Draft_46 Lizalica_Draft_47 Lizalica_Draft_48 Lizalica_Draft_49 Lizalica_Draft_50 Lizalica_Draft_51 Lizalica_Draft_52 Lizalica_Draft_53 Lizalica_Draft_54 Lizalica_Draft_55 Lizalica_Draft_56 Lizalica_Draft_57 Lizalica_Draft_58 Lizalica_Draft_59 Lizalica_Draft_60 Lizalica_Draft_61 Lizalica_Draft_62 Lizalica_Draft_63 Lizalica_Draft_64 Lizalica_Draft_65 Lizalica_Draft_66 Lizalica_Draft_67 Lizalica_Draft_68 Lizalica_Draft_69 Lizalica_Draft_70 Lizalica_Draft_71 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 128 |
Pitt Freezer Box Grid# | E11 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |