| Detailed Information for Phage Tallboi |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Former names | URadopted |
| Duplicates of this Phage | Goopy |
| Found By | Aye Myat Khaine |
| Year Found | 2021 |
| Location Found | Los Angeles, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.049733 N, 118.432392 W Map |
| Discovery Notes | The sample was taken from a site near a tree on a grass patch in an urban residential area. The grass patch is located in front of an apartment and is surrounded by cement but the collection site is at the bottom of a tree closer to the center of the grass patch. The grass patch is regularly watered. It is not sloped. Sample was taken from a depth of 4.5cm. Air temperature was 14℃ on the day sample was collected.
AL Quarter and Lab section: F21-1B
Instructor: Amanda Freise; Ana Garcia Vedrenne
Teaching Assistant: Ryan Ngo
Undergraduate Assistant(s): Amanda Chai
Team #1 Name: Gene Z
Team #1 Members: Kiana Erfanian, Aye Myat Khaine, Katherine McLinden, Evgeniy Uvarov
Team #2 Name: Apple Bottom Genes
Team #2 Members: Adrienne Lee, Janelle Magaling, Elyse Ostroske, Charysa Santos |
| Naming Notes | Tallboi was so named because the phage has a long tail. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 4, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1187 |
| Genome length (bp) | 43589 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAAGGGGCAT |
| GC Content | 67.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AZ |
| Subcluster | AZ1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | In GenBank |
| Plaque Notes | Plaque average size of 1.55 mm but range from 0.5 to 2mm. 2-3 mm diameter; halo and turbid |
| Number of Genes | 69 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978779 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
139 |
| Pitt Freezer Box Grid# |
G8 |
| Available Files |
| GenBank File for Phamerator | Download |