Detailed Information for Phage Adgers |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Ariel McShane |
Year Found | 2016 |
Location Found | Charleston, SC USA |
Finding Institution | College of Charleston |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 32.776097 N, 79.925374 W Map |
Discovery Notes | Soil was taken from the edge of the marsh-like border of the Charleston Harbor. The top layer of fallen reeds was pushed aside and the soil underneath was sampled. |
Naming Notes | The name of this phage is the name of a small street near the sampling site that I saw as I was collecting the soil. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1135 |
Genome length (bp) | 76008 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 191 bp |
GC Content | 59.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CS |
Subcluster | CS2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | This phage is suspected to be a temperate phage, as the plaques would clear at the edges and then have new bacterial growth in the center. |
Morphotype | Siphoviridae |
Number of Genes | 108 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG757152 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
GenBank File for Phamerator | Download |