Gordonia phage Luker
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Detailed Information for Phage Luker
Discovery Information
Isolation HostGordonia terrae 3612
Found ByHailey Roup
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.443755 N, 79.955155 W Map
Discovery NotesFound in mulch
Near cigarette
Near bush
Naming NotesI love my brother very much. His name is Luke. Luke loves sloths and I love Luke.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 8, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage396
Genome length (bp)73453
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length161 bp
GC Content59.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS3
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesTiny pinholes (0.5-1mm) with a few large plaques (3mm) in the lawn.
Has been Phamerated?Yes
Gene List

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Luker_1

Luker_2
(DNA helicase)

Luker_3

Luker_4

Luker_5
(DNA primase)

Luker_6

Luker_7
(terminase)

Luker_8
(portal protein)

Luker_9
(minor tail protein)

Luker_10

Luker_11
(capsid maturation protease)

Luker_12
(capsid decoration protein)

Luker_13
(major capsid protein)

Luker_14

Luker_15

Luker_16
(head-to-tail adaptor)

Luker_17

Luker_18

Luker_19

Luker_20
(major tail protein)

Luker_22
(tail assembly chaperone)

Luker_23
(tail assembly chaperone)

Luker_24

Luker_25
(tape measure protein)

Luker_26
(minor tail protein)

Luker_27
(minor tail protein)

Luker_28
(minor tail protein)

Luker_29

Luker_30

Luker_31

Luker_32

Luker_33

Luker_34

Luker_35

Luker_36
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Luker_37
(lysin A, protease M23 domain)

Luker_38

Luker_39

Luker_40

Luker_41

Luker_42
(Cas4 family exonuclease)

Luker_43
(WhiB family transcription factor)

Luker_44

Luker_45

Luker_46

Luker_47
(DNA methylase)

Luker_48

Luker_49

Luker_50
(MazG-like nucleotide pyrophosphohydrolase)

Luker_51
(RusA-like resolvase)

Luker_52
(nucleoside deoxyribosyltransferase)

Luker_53
(DNA polymerase III sliding clamp)

Luker_54

Luker_55
(DNA polymerase III subunit)

Luker_56
(helix-turn-helix DNA binding protein)

Luker_57

Luker_58
(DNA helicase)

Luker_59

Luker_60

Luker_61

Luker_62
(helix-turn-helix DNA binding protein)

Luker_63

Luker_64

Luker_65

Luker_66

Luker_67

Luker_68

Luker_69

Luker_70

Luker_71

Luker_72

Luker_73

Luker_74

Luker_75

Luker_76

Luker_77

Luker_78

Luker_79

Luker_80

Luker_81

Luker_82
(CobT-like cobalamin biosynthesis protein)

Luker_83
(AAA-ATPase)

Luker_84

Luker_85

Luker_86

Luker_87

Luker_88

Luker_89

Luker_90

Luker_91

Luker_92

Luker_93

Luker_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK919477
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 90
Pitt Freezer Box Grid# E6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload