Gordonia phage Linetti
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Detailed Information for Phage Linetti
Discovery Information
Isolation HostGordonia terrae NRRL B-16283
Found ByCameron Kedy and Hari Kotturi
Year Found2019
Location FoundYukon, OK USA
Finding InstitutionUniversity of Central Oklahoma
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature28°C
GPS Coordinates35.518333 N, 97.784722 W Map
Discovery NotesThe soil was collected from an area of stagnant water on the side of Canadian river. It was a mix of red-clay and water.
Naming NotesCharacter name from Brooklyn-99
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1519
Genome length (bp)78164
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content58.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Central Oklahoma
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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Linetti_1

Linetti_2

Linetti_3

Linetti_4

Linetti_5
(ssDNA binding protein, ERF family)

Linetti_6

Linetti_7

Linetti_8

Linetti_9
(DNA primase)

Linetti_10
(terminase, small subunit)

Linetti_11
(terminase, large subunit)

Linetti_12
(portal protein)

Linetti_13
(tail fiber)

Linetti_14

Linetti_15
(capsid maturation protease)

Linetti_16
(capsid decoration protein)

Linetti_17
(major capsid protein)

Linetti_18

Linetti_19

Linetti_20
(head-to-tail adaptor)

Linetti_21

Linetti_22

Linetti_23

Linetti_24
(major tail protein)

Linetti_26
(tail assembly chaperone)

Linetti_27
(tail assembly chaperone)

Linetti_28
(tape measure protein)

Linetti_29
(minor tail protein)

Linetti_30
(minor tail protein)

Linetti_31
(minor tail protein)

Linetti_32

Linetti_33
(holin)

Linetti_34

Linetti_35
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Linetti_36
(lysin A, protease M23 domain)

Linetti_37

Linetti_38

Linetti_39

Linetti_40

Linetti_41
(Cas4 family exonuclease)

Linetti_42

Linetti_43

Linetti_44

Linetti_45

Linetti_46

Linetti_47
(DNA methylase)

Linetti_48

Linetti_49

Linetti_50

Linetti_51
(lysin B)

Linetti_52
(MazG-like nucleotide pyrophosphohydrolase)

Linetti_53
(RusA-like resolvase (endonuclease))

Linetti_54
(nucleoside deoxyribosyltransferase)

Linetti_55
(DNA polymerase III sliding clamp (Beta))

Linetti_56
(DnaQ-like (DNA polymerase III subunit))

Linetti_57
(helix-turn-helix DNA binding domain)

Linetti_58

Linetti_59
(DNA helicase)

Linetti_60

Linetti_61

Linetti_62

Linetti_63
(helix-turn-helix DNA binding domain)

Linetti_64

Linetti_65

Linetti_66

Linetti_67

Linetti_68

Linetti_69

Linetti_70

Linetti_71

Linetti_72

Linetti_73

Linetti_74

Linetti_75

Linetti_76

Linetti_77

Linetti_78

Linetti_79

Linetti_80

Linetti_81

Linetti_82

Linetti_83
(HNH endonuclease)

Linetti_84

Linetti_85

Linetti_86

Linetti_87

Linetti_88

Linetti_89
(CobT-like cobalamin biosynthesis protein)

Linetti_90
(AAA-ATPase)

Linetti_91

Linetti_92

Linetti_93

Linetti_94

Linetti_95

Linetti_96

Linetti_97

Linetti_98

Linetti_99

Linetti_100

Linetti_101

Linetti_102

Linetti_103

Linetti_104

Linetti_105

Linetti_106

Linetti_107

Linetti_108

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT986029
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload