Gordonia phage Lidong
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Detailed Information for Phage Lidong
Discovery Information
Isolation HostGordonia terrae 3612
Found ByJialu Wang, Daphne Ngape
Year Found2021
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.444 N, 79.96 W Map
Discovery NotesIt was a sunny day and the soil was moist.
Naming NotesNamed after a Chinese Festival.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1461
Genome length (bp)73505
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length161 bp
GC Content59.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS3
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusQC Complete
Has been Phamerated?Yes
Gene List

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Lidong_1

Lidong_2
(DNA helicase)

Lidong_3

Lidong_4

Lidong_5
(DNA primase)

Lidong_6

Lidong_7
(terminase)

Lidong_8
(portal protein)

Lidong_9
(minor tail protein)

Lidong_10

Lidong_11
(capsid maturation protease)

Lidong_12
(capsid decoration protein)

Lidong_13
(major capsid protein)

Lidong_14

Lidong_15

Lidong_16
(head-to-tail adaptor)

Lidong_17

Lidong_18

Lidong_19

Lidong_20
(major tail protein)

Lidong_22
(tail assembly chaperone)

Lidong_23
(tail assembly chaperone)

Lidong_24
(tape measure protein)

Lidong_25
(minor tail protein)

Lidong_26
(minor tail protein)

Lidong_27
(minor tail protein)

Lidong_28

Lidong_29

Lidong_30

Lidong_31

Lidong_32

Lidong_33
(holin)

Lidong_34

Lidong_35
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Lidong_36
(lysin A, protease M23 domain)

Lidong_37

Lidong_38

Lidong_39

Lidong_40

Lidong_41
(Cas4 family exonuclease)

Lidong_42
(WhiB family transcription factor)

Lidong_43

Lidong_44

Lidong_45

Lidong_46
(DNA methyltransferase)

Lidong_47

Lidong_48

Lidong_49
(MazG-like nucleotide pyrophosphohydrolase)

Lidong_50
(RusA-like resolvase (endonuclease))

Lidong_51
(nucleoside deoxyribosyltransferase)

Lidong_52
(DNA polymerase III sliding clamp (Beta))

Lidong_53

Lidong_54
(DnaQ-like DNA polymerase III subunit)

Lidong_55
(helix-turn-helix DNA binding domain, MerR-like)

Lidong_56

Lidong_57
(DNA helicase)

Lidong_58

Lidong_59

Lidong_60

Lidong_61
(helix-turn-helix DNA binding domain)

Lidong_62

Lidong_63

Lidong_64

Lidong_65

Lidong_66

Lidong_67

Lidong_68

Lidong_69

Lidong_70

Lidong_71

Lidong_72

Lidong_73

Lidong_74

Lidong_75

Lidong_76

Lidong_77

Lidong_78

Lidong_79

Lidong_80

Lidong_81
(CobT-like cobalamin biosynthesis protein)

Lidong_82
(AAA-ATPase)

Lidong_83

Lidong_84

Lidong_85

Lidong_86

Lidong_87

Lidong_88

Lidong_89

Lidong_90

Lidong_91

Lidong_92

Lidong_93

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 141
Pitt Freezer Box Grid# E9
Available Files
GenBank File for PhameratorDownload