Gordonia phage Jellybones
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Detailed Information for Phage Jellybones
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found BySamantha J Pochiro
Year Found2018
Location FoundHenderson, NV USA
Finding InstitutionCollege of Southern Nevada
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates36.076304 N, 115.002681 W Map
Discovery Notes•The sample was collected at the City of Henderson Bird Viewing Preserve along the north east side of pond number 2
•The coordinates of the location is: 36.076304, -115.002681
•The sample was dry and had a lot of small twigs or broken root parts in it. I dug about an inch or two below the surface until I saw darker sand underneath the surface.
•It was collected in Henderson, NV on 9/5/18.
Naming NotesJellybones was named after a song from the band The Unicorns.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 2, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1592
Genome length (bp)77514
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content59.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCollege of Southern Nevada
Annotation StatusAwaiting_QC
Plaque NotesThe phage produced small plaques ranging from 1/2mm to 1mm in size with distinct borders
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 80
Pitt Freezer Box Grid# H2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload