Gordonia phage Ekhein
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Ekhein
Discovery Information
Isolation HostGordonia terrae 3612
Found ByTrezalka Budinsky
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.440378 N, 79.955711 W Map
Discovery NotesThe soil sample was taken from the Oakland Avenue Farm, which is located on Oakland Avenue across from Bouquet Gardens. The soil was partly dry, due to the fact that we have not had rain in a while. The soil was not compact, therefore, very loose and easy to collect. The weather at the time of collection was extremely hot, dry, and sunny. The area of collection was located specifically in a plot of garden soil, which was a wide, open space.
Naming NotesThe ancient Greek word for "restrain" - our phage's plaques are restrained to a tiny area. It is also the origin of the name Hektor - a famous Trojan hero from the Iliad.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage675
Genome length (bp)76612
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversidad Autónoma de Nuevo León
Annotation StatusAwaiting_QC
Plaque NotesSmall clear plaques - ranging from 0.5 to 2.0mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Ekhein_Draft_1

Ekhein_Draft_2

Ekhein_Draft_3

Ekhein_Draft_4

Ekhein_Draft_5

Ekhein_Draft_6

Ekhein_Draft_7

Ekhein_Draft_8

Ekhein_Draft_9

Ekhein_Draft_10

Ekhein_Draft_11

Ekhein_Draft_12

Ekhein_Draft_13

Ekhein_Draft_14

Ekhein_Draft_15

Ekhein_Draft_16

Ekhein_Draft_17

Ekhein_Draft_18

Ekhein_Draft_19

Ekhein_Draft_20

Ekhein_Draft_21

Ekhein_Draft_22

Ekhein_Draft_23

Ekhein_Draft_25

Ekhein_Draft_26

Ekhein_Draft_27

Ekhein_Draft_28

Ekhein_Draft_29

Ekhein_Draft_30

Ekhein_Draft_31

Ekhein_Draft_32

Ekhein_Draft_33

Ekhein_Draft_34

Ekhein_Draft_35

Ekhein_Draft_36

Ekhein_Draft_37

Ekhein_Draft_38

Ekhein_Draft_39

Ekhein_Draft_40

Ekhein_Draft_41

Ekhein_Draft_42

Ekhein_Draft_43

Ekhein_Draft_44

Ekhein_Draft_45

Ekhein_Draft_46

Ekhein_Draft_47

Ekhein_Draft_48

Ekhein_Draft_49

Ekhein_Draft_50

Ekhein_Draft_51

Ekhein_Draft_52

Ekhein_Draft_53

Ekhein_Draft_54

Ekhein_Draft_55

Ekhein_Draft_56

Ekhein_Draft_57

Ekhein_Draft_58

Ekhein_Draft_59

Ekhein_Draft_60

Ekhein_Draft_61

Ekhein_Draft_62

Ekhein_Draft_63

Ekhein_Draft_64

Ekhein_Draft_65

Ekhein_Draft_66

Ekhein_Draft_67

Ekhein_Draft_68

Ekhein_Draft_69

Ekhein_Draft_70

Ekhein_Draft_71

Ekhein_Draft_72

Ekhein_Draft_73

Ekhein_Draft_74

Ekhein_Draft_75

Ekhein_Draft_76

Ekhein_Draft_77

Ekhein_Draft_78

Ekhein_Draft_79

Ekhein_Draft_80

Ekhein_Draft_81

Ekhein_Draft_82

Ekhein_Draft_83

Ekhein_Draft_84

Ekhein_Draft_85

Ekhein_Draft_86

Ekhein_Draft_87

Ekhein_Draft_88

Ekhein_Draft_89

Ekhein_Draft_90

Ekhein_Draft_91

Ekhein_Draft_92

Ekhein_Draft_93

Ekhein_Draft_94

Ekhein_Draft_95

Ekhein_Draft_96

Ekhein_Draft_97

Ekhein_Draft_98

Ekhein_Draft_99

Ekhein_Draft_100

Ekhein_Draft_101

Ekhein_Draft_102

Ekhein_Draft_103

Ekhein_Draft_104

Ekhein_Draft_105

Ekhein_Draft_106

Ekhein_Draft_107

Ekhein_Draft_108

Ekhein_Draft_109

Ekhein_Draft_110

Ekhein_Draft_111

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 114
Pitt Freezer Box Grid# B8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload