Gordonia phage GourdThymes
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Detailed Information for Phage GourdThymes
Discovery Information
Isolation HostGordonia terrae 3612
Found BySrija Konduru
Year Found2019
Location FoundHummelstown, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.24 N, 76.72 W Map
Discovery NotesIt has not rained in a while, so the soil was quite dry.
Isolated in September, so the leaves were starting to fall and the garden plants were starting to die.
Soil was isolated from a garden, surrounded by trees, with pink roses, yellow cucumber, (red, green, and black) chillies, herbs, and tomatoes.
Naming NotesA pun about the vegetation from the garden where the soil was taken from (cucumbers and herbs).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage901
Genome length (bp)75807
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusQC Complete
Plaque NotesThe plaques for Phage GourdThymes are relatively small (<2mm in diameter) and clear.
Has been Phamerated?Yes
Gene List

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Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload