Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Deepa Thomas, Vanessa Oviedo |
Year Found | 2019 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.441502 N, 80.002022 W Map |
Discovery Notes | The soil was moist and covered in mulch. It was cloudy and warm outside. The area where the soil was collected was surrounded by bushes, trees, and mulch. Lots of birds were in the trees above. |
Naming Notes | Vanessa Oviedo collected the soil sample containing this and another phage. She named the phage she conducted experiments on "Amore," which means love, and we decided to name this second one "Amore2." |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 5, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 988 |
Genome length (bp) | 73842 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 179 bp |
GC Content | 56.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CS |
Subcluster | CS1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of North Georgia |
Annotation Status | In GenBank |
Plaque Notes | The plaque is small, with about 1 mm diameter, and clear. |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | ON526973 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
113 |
Pitt Freezer Box Grid# |
E7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |