| Detailed Information for Phage Kaseim |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | M. Gomez, F. Joy, B. Ramcoobeer, K. Gregg |
| Year Found | 2022 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.4456 N, 79.96129 W Map |
| Discovery Notes | The soil sample was collected on 09/07/2022 at 21:92 outside the Pittsburgh VA Medical Center. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 5, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 40 |
| Genome length (bp) | 72748 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 184 bp |
| GC Content | 59.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | QC Complete |
| Plaque Notes | After at least 5 days of incubation at 30°C: range of small, circular, clear plaques approximately 1.5 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 92 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
159 |
| Pitt Freezer Box Grid# |
F10 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
