Detailed Information for Phage Sooty |
Discovery Information |
Isolation Host | Curtobacterium flaccumfaciens NRRL B-729 SEA |
Found By | Sophia Sliter-Hays |
Year Found | 2024 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.447418 N, 79.950196 W Map |
Discovery Notes | Found in the garden bed in front of the synod at St. Paul's Cathedral. |
Naming Notes | Named after one of my cats and good friends. Pronounced sue-dee. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 1, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 3509 |
Genome length (bp) | 40056 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAACGGCAT |
GC Content | 70.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AZ |
Subcluster | AZ5 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | Being Annotated (Expected completion by 4/1/2025) |
Plaque Notes | The plaques are small, round, and clear. |
Number of Genes | 66 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |