Detailed Information for Phage Bavilard |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Liliana Avila |
Year Found | 2024 |
Location Found | Jeffersonville, IN United States |
Finding Institution | Indiana University-Southeast |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 26°C |
GPS Coordinates | 38.342189 N, 85.687757 W Map |
Discovery Notes | It was found under a tree where the soil was clay-heavy, dry, and crumbly with biological matter. It was collected in the morning (around 8am) at a temperature of 21°C. |
Naming Notes | The name is a combination of my lab partner and I's last names. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 5169 |
Genome length (bp) | 47051 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCTT |
GC Content | 60.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CT |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Indiana University-Southeast |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Morphotype | Siphoviridae |
Number of Genes | 72 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |