Detailed Information for Phage Benczkowski14 |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Matthew Benczkowski |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 17°C |
GPS Coordinates | 40.443 N, 79.957 W Map |
Discovery Notes | Found on a cool day, moist soil, soil collected in the early morning. Soil was home to flowers. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 12, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 944 |
Genome length (bp) | 75380 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 1172 bp |
GC Content | 59.5% |
Sequencing Notes | in seq file terminal repeat start 21840 to 23011 approx 2x reads |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CS |
Subcluster | CS4 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Number of Genes | 99 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU963262 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
2 |
Pitt Freezer Box Grid# |
C8 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |