Streptomyces phage Dexers
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Detailed Information for Phage Dexers
Discovery Information
Isolation HostStreptomyces bicolor NRRL B-3897
Found ByRemington Kirchner
Year Found2022
Location FoundDenton, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates33.17704 N, 97.12435 W Map
Discovery NotesCollected soil from southern Denton, TX, 5 yards from Trinity United Methodist Church parking lot. At 7:35PM the temperature was 25 degrees C with light-medium rain. Sample was collected at the base of a stump and was dug about .5 inches down.
Naming NotesIt was inspired by my diabetic alert service dog named Dex, because he has been with me throughout this process and continues to keep me going every day.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage2435
Genome length (bp)48907
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGTACGTGAT
GC Content66.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD3
Cluster Life CycleTemperate
Other Cluster Members

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Aaronocolus (BD1)

Asten (BD1)

BarryBee (BD1)

BeardedLady (BD1)

Bovely (BD1)

Brataylor (BD1)

BryanRecycles (BD1)

Caliburn (BD1)

Celeste (BD1)

Chucky (BD1)

Danzina (BD1)

Dattran (BD1)

Dwayne (BD1)

Eddasa (BD1)

Ejemplo (BD1)

Emaanora (BD1)

EnochSoames (BD1)

Esperer (BD1)

Goby (BD1)

Godpower (BD1)

Hippo (BD1)

Hydra (BD1)

Indigo (BD1)

Izzy (BD1)

Jash (BD1)

Katalie (BD1)

Lannister (BD1)

Legacy (BD1)

Leviticus (BD1)

Lika (BD1)

Lorelei (BD1)

Maneekul (BD1)

Nabi (BD1)

Nanodon (BD1)

Nerdos (BD1)

Oliynyk (BD1)

Ozzie (BD1)

OzzyJ (BD1)

Phettuccine (BD1)

Rana (BD1)

RedBear (BD1)

Rusticus (BD1)

SarahRose (BD1)

Snorlax (BD1)

South40 (BD1)

Sujidade (BD1)

SunsetPointe (BD1)

TagePhighter (BD1)

Toma (BD1)

Triste (BD1)

TuanPN (BD1)

Unstoppable (BD1)

Werner (BD1)

Whatever (BD1)

Yasdnil (BD1)

Zemlya (BD1)

Alvy (BD2)

Amethyst (BD2)

Andris (BD2)

Animus (BD2)

BartholomewSD (BD2)

Bowden (BD2)

Caelum (BD2)

Daudau (BD2)

Diane (BD2)

ELB20 (BD2)

GirlDinner (BD2)

Haizum (BD2)

Hank144 (BD2)

Issmi (BD2)

Janus (BD2)

Jevington (BD2)

Loofah (BD2)

Marav (BD2)

Nishikigoi (BD2)

Omar (BD2)

Pablito (BD2)

Paedore (BD2)

Paolo (BD2)

Puginator (BD2)

R4 (BD2)

SqueakyClean (BD2)

Superstar (BD2)

Tefunt (BD2)

Thestral (BD2)

TinaBelcher (BD2)

Triumph (BD2)

TrvxScott (BD2)

Zainub (BD2)

Alsaber (BD3)

Amela (BD3)

Celery (BD3)

Conan (BD3)

Dexers (BD3)

ElGato (BD3)

Kaine (BD3)

Pavo (BD3)

phiCAM (BD3)

Provolone (BD3)

Saftant (BD3)

Speedwell (BD3)

Vanseggelen (BD3)

Verabelle (BD3)

Verse (BD3)

Yosif (BD3)

BroPlease (BD4)

GreenWeasel (BD4)

phiHau3 (BD4)

StrepC (BD5)

Celia (BD6)

Itza (BD6)

Urza (BD6)

VieEnRose (BD6)

Annotating InstitutionUniversity of North Texas
Annotation StatusIn GenBank
Plaque NotesPlates consisted of clear, round plaques. Most were consistently 1mm in diameter, with a few measuring 0.5mm and 0.25mm in addition.
Number of Genes74
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Dexers_1

Dexers_2

Dexers_3

Dexers_4
(terminase small subunit)

Dexers_5
(terminase large subunit)

Dexers_6
(portal protein)

Dexers_7

Dexers_8
(scaffolding protein)

Dexers_9
(major capsid protein)

Dexers_10
(head-to-tail adaptor)

Dexers_11
(head-to-tail stopper)

Dexers_12

Dexers_13
(tail terminator)

Dexers_14
(major tail protein)

Dexers_15
(tail assembly chaperone)

Dexers_16
(tail assembly chaperone)

Dexers_17
(tape measure protein)

Dexers_18
(minor tail protein)

Dexers_19
(minor tail protein)

Dexers_20

Dexers_21
(minor tail protein)

Dexers_22

Dexers_23

Dexers_24
(minor tail protein)

Dexers_25

Dexers_26
(endolysin)

Dexers_27

Dexers_28
(DNA binding protein)

Dexers_29
(immunity repressor)

Dexers_30

Dexers_31
(Cas4-family exonuclease)

Dexers_32

Dexers_33

Dexers_34
(deoxycytidylate deaminase)

Dexers_35
(DnaB-like dsDNA helicase)

Dexers_36
(holliday junction resolvase)

Dexers_37

Dexers_38
(DNA primase)

Dexers_39
(DNA primase)

Dexers_40

Dexers_41
(helix-turn-helix DNA binding domain protein)

Dexers_42
(MRE11 double-strand break endo/exonuclease)

Dexers_43

Dexers_44
(DNA binding protein)

Dexers_45

Dexers_46
(ribonucleotide reductase)

Dexers_47

Dexers_48
(Lsr2-like DNA bridging protein)

Dexers_49

Dexers_50
(serine integrase)

Dexers_51
(ThyX-like thymidylate synthase)

Dexers_52

Dexers_53

Dexers_54

Dexers_55

Dexers_56

Dexers_57

Dexers_58

Dexers_59
(deoxynucleoside monophosphate kinase)

Dexers_60

Dexers_61
(HNH endonuclease)

Dexers_62

Dexers_63

Dexers_64

Dexers_65

Dexers_66

Dexers_67

Dexers_68
(OCR-like antirestriction protein)

Dexers_69

Dexers_70

Dexers_71

Dexers_72

Dexers_73

Dexers_74
(acetyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ995439
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 162
Pitt Freezer Box Grid# H10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload